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Leaf FLUSPECT-B-Cx model for SCOPE

getFluspect.Cx.SCOPE.Rd

getFluspect.Cx.SCOPE calculates reflectance and transmittance spectra of a leaf using FLUSPECT-B, calculates reflectance and transmittance spectra of a leaf using FLUSPECT-B, plus four excitation-fluorescence matrices

Usage

getFluspect.Cx.SCOPE(inputsLeaf, inputsOptipar, version = "Cx", step)

Arguments

inputsLeaf

a LUT with main plnt traits for Fluspect-B Cx

inputsOptipar

internal parameters

version

Leaf model uses for Kcal: 'Cx'

step

a step for wavelengths for getting a matrix of Mf and Mb, by default uses a step of 1 nm, This step return matrix of 211x351 the SCOPE model uses a step of 5 for getting matrix of 53x71

Value

a list which contains:

  • refl (reflectance)

  • tran (transmittance)

  • Mb (backward scattering fluorescence matrix, I for PSI and II for PSII)

  • Mf (forward scattering fluorescence matrix, I for PSI and II for PSII)

Author

Wout Verhoef, Christiaan van der Tol, Joris Timmermans, Nastassia Vilfan (Original version in Matlab)

Carlos Camino (Ported version into R)

Matlab version: Date: 2007-2020

Ported in R: Jun-2023

Examples

if (FALSE) { # \dontrun{
inputs <- ToolsRTM::inputsRTMs
LUT <- as.data.frame(ToolsRTM::getLUT(inputs = inputs, nLUT = 1, setseed = 1234))
sim <- getFluspect.Cx.SCOPE(inputsLeaf = LUT, inputsOptipar = SCOPEinR::optipar, version = 'Cx')
} # }