get simulations based on SCOPE model

Main module for calling the SCOPE model

Usage

get.SCOPE.ind(
  LUT,
  options.SCOPE = data.opts,
  optipar,
  path.out,
  leaf.model = "fluspect-CX",
  canopy.model = "fourSAIL",
  get.outputs,
  get.plots = T
)

Arguments

LUT

leaf, biochemistry, viewing angles,meteo, and canopy properties needed for running SCOPE model.

options.SCOPE

simulation options controlling the SCOPE run, such as the atmospheric correction and whether to correct the total irradiance if a specific value is provided instead of the usual Modtran output.

optipar

leaf optical parameters used by the selected leaf model (e.g. Fluspect refractive index and specific absorption coefficients).

path.out

folder for saving the SCOPE outputs.

leaf.model

Not currently functional – see get.SCOPE. Passing anything other than 'fluspect-CX' triggers a warning.

canopy.model

Not currently functional – see get.SCOPE (same underlying limitation: SCOPE's canopy engine isn't swappable yet). Passing anything other than 'fourSAIL' triggers a warning.

get.outputs

if get.outputs = 'ALL' all variables were retrieved; if get.outputs = 'Main' the main variables were retrieved. By default SCOPE uses get.outputs = 'ALL', for processiong huge LUT is recommended get.outputs = 'Main'.

get.plots

is true plot the intermediate plots

References

Yang, P., E. Prikaziuk, W. Verhoef, and C. van der Tol. 2020. “SCOPE 2.0: A Model to Simulate Vegetated Land Surface Fluxes and Satellite Signals.” Geoscientific Model Development Discussions 2020: 1–26. https://doi.org/10.5194/gmd-2020-251.

Van der Tol, C., W. Verhoef, J Timmermans, A Verhoef, and Z Su. 2009. “An Integrated Model of Soil-Canopy Spectral Radiances, Photosynthesis, Fluorescence, Temperature and Energy Balance.” Biogeosciences 6 (12): 3109–29. https://doi.org/10.5194/bg-6-3109-2009.

Author

Wout Verhoef, Prikaziuk, Christiaan van der Tol, Joris Timmermans (Original version in Matlab)

Carlos Camino (Ported version into R)

Examples

if (FALSE) { # \dontrun{
out <- get.SCOPE.ind(LUT, options.SCOPE = data.opts, optipar, path.out,
                      leaf.model = "fluspect-CX", canopy.model = "fourSAIL",
                      get.outputs = "Main", get.plots = FALSE)
} # }